This contribution provides the raw files for the μCT-scan data and renderings of the three-dimensional digital models of two fossil teeth of a geomyin geomorph rodent (Caribeomys merzeraudi), discovered from lower Oligocene deposits of Puerto Rico, San Sebastian Formation (locality LACM Loc. 8060). These fossils were described, figured and discussed in the following publication: Marivaux et al. (2021), An unpredicted ancient colonization of the West Indies by North American rodents: dental evidence of a geomorph from the early Oligocene of Puerto Rico. Papers in Palaeontology. https://doi.org/10.1002/spp2.1388 

Caribeomys merzeraudi LACM 162478 View specimen

	M3#712 Right lower dp4: isolated deciduous premolar. The specimen was scanned with a resolution of 5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). AVIZO 7.1 (Visualization Sciences Group) software was used for visualization, segmentation, and 3D rendering. This isolated tooth was prepared within a “labelfield” module of AVIZO, using the segmentation threshold selection tool. Type: "3D_surfaces" doi: 10.18563/m3.sf.712   state:published	Download 3D surface file
	M3#714 5µm µCT data set . Right lower dp4: isolated deciduous premolar. The specimen was scanned with a resolution of 5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). Type: "3D_CT" doi: 10.18563/m3.sf.714   state:published	Download CT data

Caribeomys merzeraudi LACM 162449 View specimen

	M3#713 Right lower molar (m1 or m2). The specimen was scanned with a resolution of 4.5 µm using a μ-CT-scanning station EasyTom 150 / Rx Solutions (Montpellier RIO Imaging, ISE-M, Montpellier, France). AVIZO 7.1 (Visualization Sciences Group) software was used for visualization, segmentation, and 3D rendering. This isolated tooth was prepared within a “labelfield” module of AVIZO, using the segmentation threshold selection tool. Type: "3D_surfaces" doi: 10.18563/m3.sf.713   state:published	Download 3D surface file
	M3#715 µCT data at 4.5µm Type: "3D_CT" doi: 10.18563/m3.sf.715   state:published	Download CT data

This contribution contains 3D models of the cranial skeleton and muscles in an elephantfish (Callorhinchus milii) and a catshark (Scyliorhinus canicula), based on synchrotron tomographic scans. These datasets were analyzed and described in Dearden et al. (2021) “The morphology and evolution of chondrichthyan cranial muscles: a digital dissection of the elephantfish Callorhinchus milii and the catshark Scyliorhinus canicula.” Journal of Anatomy. 

Callorhinchus milii 001 View specimen

M3#708 3D models of the cranial skeleton and muscles of Callorhinchus milii, created using Mimics. Type: "3D_surfaces" doi: 10.18563/m3.sf.708   state:published

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Scyliorhinus canicula 002 View specimen

M3#709 3D models of the cranial skeleton and muscles of Scyliorhinus canicula, created using Mimics. Type: "3D_surfaces" doi: 10.18563/m3.sf.709   state:published

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Our knowledge of the external brain morphology of the late Eocene artiodactyl ungulate Mixtotherium, relies on a plaster model realized on a specimen from the Victor Brun Museum in Montauban (France) and described by Dechaseaux (1973). Here, based on micro CT-scan data, we virtually reconstruct the 3D cast of the empty cavity of the partial cranium MA PHQ 716 from the Victor Brun Museum and compare it to the plaster model illustrated and described by Dechaseaux (1973). Indeed, the specimen from which the original plaster endocast originates was not identified by Dechaseaux by a specimen number. We confirm here that the studied specimen was indeed the one described and illustrated by Dechaseaux (1973). We also reconstruct a second, more detailed, model providing additional morphological and quantitative observations made available by micro CT scan investigation such as precisions on the neopallium folding and endocranial volumes.
  

Mixtotherium cuspidatum MA PHQ 716 View specimen

M3#857 endocast of the brain cavity Type: "3D_surfaces" doi: 10.18563/m3.sf.857   state:published

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This contribution contains the 3D models described and figured in: New remains of Neotropical bunodont litopterns and the systematics of Megadolodinae (Mammalia: Litopterna). Geodiversitas. 

Megadolodus molariformes VPPLT 974 View specimen

M3#1020 Partial mandible with the symphysis and left body, bearing the alveoli of ?i2, right and left ?i3, alveolus of right c and p1, roots of left p1, and the left p2–m3 of Megadolodus molariformes (Litopterna, Mammalia) Type: "3D_surfaces" doi: 10.18563/m3.sf.1020   state:published

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Neodolodus colombianus VPPLT 1696 View specimen

	M3#1021 Almost complete skull with left and right ?I2 and P1–M3 Type: "3D_surfaces" doi: 10.18563/m3.sf.1021   state:published	Download 3D surface file
	M3#1022 Partial mandible with complete right and left dentition except for left ?i2 Type: "3D_surfaces" doi: 10.18563/m3.sf.1022   state:published	Download 3D surface file

The present 3D Dataset contains the 3D models analyzed in Keppeler, H., Schultz, J. A., Ruf, I., & Martin, T., 2023. Cranial anatomy of Hypisodus minimus (Artiodactyla: Ruminantia) from the Oligocene Brule Formation of North America. Palaeontographica Abteilung A. 

Hypisodus minimus SMNK-PAL 27212 View specimen

	M3#1031 CT image stack of a skull of Hypisodus minimus. Also includes a lumbar vertebra and a probable proximal phalanx of digit III or IV. Type: "3D_CT" doi: 10.18563/m3.sf.1031   state:published	Download CT data
	M3#1036 3D surface models of a skull of Hypisodus minimus (SMNK-PAL27212). The data includes a surface model for: basisphenoid, tympanic bullae, ethmoid (lamina perpendicularis), frontals, jugal (left), jugal (right), lacrimals, lower dentition, mandibles, mastoid processes, maxillaries, maxilloturbinals, nasals, occipital, palatine, parietals, petrosals, presphenoid, squamosals, turbinates, upper dentition, and the vomer. Type: "3D_surfaces" doi: 10.18563/m3.sf.1036   state:published	Download 3D surface file

Hypisodus minimus SMNK-PAL 27213 View specimen

	M3#1033 CT image stack of a skull of Hypisodus minimus. Also shows numerous postcranial material including an atlas articulated with the occipital bone, the distal part of a left humerus articulated to radius and ulna, a part of a femur, a part of a tibia and fibula, unidentifiable tarsal bones, parts of the metatarsals II, III, IV and V and their phalanges, a proximal phalanx of digit III or IV, a middle phalanx of digit III or IV, a possible patella and calcaneus, as well as numerous unidentifiable broken bony fragments. Type: "3D_CT" doi: 10.18563/m3.sf.1033   state:published	Download CT data
	M3#1035 3D surface models of a skull of Hypisodus minimus (SMNK-PAL27213). The data includes a surface model for: atlas, basisphenoid, tympanic bullae, nasals, occipital, the petrosals, and the inner ear. Type: "3D_surfaces" doi: 10.18563/m3.sf.1035   state:published	Download 3D surface file

The present 3D Dataset contains 3D models of the holotypes described in Aiglstorfer et al.  (2023a). Miocene Moschidae (Mammalia, Ruminantia) from the Linxia Basin (China) connect Europe and Asia and show early evolutionary diversity of a today monogeneric family. Palaeogeography, Palaeoclimatology, Palaeoecology. 

Micromeryx? caoi CUGB GV 87045 View specimen

M3#1112 3D models of the holotype of “Micromeryx” caoi (CUGB GV87045) including the models of the teeth, the mandibule, and the sediment. Type: "3D_surfaces" doi: 10.18563/m3.sf.1112   state:published

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Hispanomeryx linxiaensis IVPP V28596 View specimen

M3#1113 3D models of the holotype of Hispanomeryx linxiaensis (IVPP V28596) including the models of the teeth, the mandibule, and the sediment. Type: "3D_surfaces" doi: 10.18563/m3.sf.1113   state:published

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The present 3D Dataset contains the 3D model analyzed in the publication : On Roth’s “human fossil” from Baradero, Buenos Aires Province, Argentina: morphological and genetic analysis. The “human fossil” from Baradero, Buenos Aires Province, Argentina, is a collection of skeleton parts first recovered by Swiss paleontologist Santiago Roth and further studied by anthropologist Rudolf Martin. By the end of the 19th century and beginning of the 20th century it was considered as one of the oldest human skeletons from the southern cone. We studied the cranial anatomy and contextualized the ancient individual remains. We discuss the context of the finding, conducted an osteobiographical assessment and performed a 3D virtual reconstruction of the skull, using micro-CT-scans on selected skull fragments and the mandible. This was followed by the extraction of bone tissue and teeth samples for radiocarbon and genetic analyses, which brought only limited results due to poor preservation and possible contamination. We estimate that the individual from Baradero is a middle-aged adult male. We conclude that the revision of foundational collections with current methodological tools brings new insights and clarifies long held assumptions on the significance of samples that were recovered when archaeology was not yet professionalized. 
  

Homo sapiens PIMUZ A/V 4217 View specimen

M3#1198 3D virtual reconstruction of the skull Type: "3D_surfaces" doi: 10.18563/m3.sf.1198   state:published

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This contribution contains the 3D models described and figured in the following publication: Hautier L, Gomes Rodrigues H, Ferreira-Cardoso S, Emerling CA, Porcher M-L, Asher R, Portela Miguez R, Delsuc F. 2023. From teeth to pad: tooth loss and development of keratinous structures in sirenians. Proceedings of the Royal Society B. https://doi.org/10.1098/rspb.2023.1932 

Dugong dugon 2005.51 View specimen

M3#1275 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1275   state:published

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Dugong dugon 2023.66 View specimen

M3#1274 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1274   state:published

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Dugong dugon 5386 View specimen

M3#1276 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1276   state:published

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Dugong dugon 1848.8.29.7/GERM 1027g View specimen

M3#1277 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth. Type: "3D_surfaces" doi: 10.18563/m3.sf.1277   state:published

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Dugong dugon 1991.413 View specimen

M3#1278 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth. Type: "3D_surfaces" doi: 10.18563/m3.sf.1278   state:published

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Dugong dugon 1991.427 View specimen

M3#1279 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth. Type: "3D_surfaces" doi: 10.18563/m3.sf.1279   state:published

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Dugong dugon 2017-3-9 View specimen

M3#1280 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth. Type: "3D_surfaces" doi: 10.18563/m3.sf.1280   state:published

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Eosiren lybica 1913-22 View specimen

M3#1281 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1281   state:published

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Halitherium taulannense RGHP C001 View specimen

M3#1282 Internal mandibular morphology. Cyan = mandibular canal; dark blue = teeth. Type: "3D_surfaces" doi: 10.18563/m3.sf.1282   state:published

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Halitherium taulannense RGHP C009 View specimen

M3#1283 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1283   state:published

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Hydrodamalis gigas 1947.10.21.1 View specimen

M3#1284 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal Type: "3D_surfaces" doi: 10.18563/m3.sf.1284   state:published

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Hydrodamalis gigas C1021 View specimen

	M3#1285 Anterior part of the mandible Type: "3D_surfaces" doi: 10.18563/m3.sf.1285   state:published	Download 3D surface file
	M3#1286 Posterior part of the mandible Type: "3D_surfaces" doi: 10.18563/m3.sf.1286   state:published	Download 3D surface file

Hydrodamalis gigas 2023.67 View specimen

M3#1287 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal Type: "3D_surfaces" doi: 10.18563/m3.sf.1287   state:published

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Libysiren sickenbergi M.82429 View specimen

M3#1288 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1288   state:published

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Libysiren sickenbergi M.45675 View specimen

M3#1289 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1289   state:published

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Prorastomus sirenoides OR.448976 View specimen

	M3#1290 Internal morphology of the left mandible. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1290   state:published	Download 3D surface file
	M3#1304 Internal morphology of the right mandible. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth. Type: "3D_surfaces" doi: 10.18563/m3.sf.1304   state:published	Download 3D surface file

Ribodon limbatus M.7073 View specimen

M3#1292 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1292   state:published

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Rytiodus capgrandi PAL2017-8-1 View specimen

M3#1293 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1293   state:published

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Trichechus inunguis 1868.12.19.2 View specimen

M3#1294 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1294   state:published

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Trichechus manatus 1843.3.10.12 View specimen

M3#1295 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth. Type: "3D_surfaces" doi: 10.18563/m3.sf.1295   state:published

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Trichechus manatus 1864.6.5.1 View specimen

M3#1296 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1296   state:published

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Trichechus manatus 1950.1.23.1 View specimen

M3#1297 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1297   state:published

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Trichechus senegalensis 1885.6.30.2 View specimen

M3#1298 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1298   state:published

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Trichechus senegalensis 1894.7.25.8 View specimen

M3#1299 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth. Type: "3D_surfaces" doi: 10.18563/m3.sf.1299   state:published

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Trichechus senegalensis V97 View specimen

M3#1302 Mandibular internal morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth. Type: "3D_surfaces" doi: 10.18563/m3.sf.1302   state:published

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Trichechus sp. 65.4.28.9 View specimen

M3#1300 Internal mandibular morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth; green = tooth alveoli. Type: "3D_surfaces" doi: 10.18563/m3.sf.1300   state:published

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Dugong dugon 1946.8.6.2 View specimen

M3#1301 Mandibular internal morphology. Orange = dorsal canaliculi; purple = mental branches; cyan = mandibular canal; dark blue = teeth. Type: "3D_surfaces" doi: 10.18563/m3.sf.1301   state:published

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The present 3D dataset contains the 3D models analyzed in the publication: Rosa, R. M., Salvador, R. B., & Cavallari, D. C. (2025). The disappearing act of the magician tree snail: anatomy, distribution, and phylogenetic relationships of Drymaeus magus (Gastropoda: Bulimulidae), a long-lost species hidden in plain sight. Zoological Journal of the Linnean Society. 

Drymaeus magus CMRP 1049 View specimen

	M3#1597 Internal organs of Drymaeus magus Type: "3D_surfaces" doi: 10.18563/m3.sf.1597   state:published	Download 3D surface file
	M3#1598 External surface of Drymaeus magus Type: "3D_surfaces" doi: 10.18563/m3.sf.1598   state:published	Download 3D surface file

This contribution contains the 3D models described and figured in the following publication: Gaetano, L. C., Abdala, F., Mancuso, C, and Vega N.2025. New traversodontid cynodont from the Late Triassic Chañares Formation. Publicación Electrónica de la Asociación Paleontológica Argentina. 

Pontognathus ignotus PULR-V 287 View specimen

M3#1647 partial snout preserving the lateralmost incisor, the base of the canine, and several postcanines Type: "3D_surfaces" doi: 10.18563/m3.sf.1647   state:published

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Massetognathus pascuali PULR-V 289 View specimen

M3#1646 partial lower jaw Type: "3D_surfaces" doi: 10.18563/m3.sf.1646   state:published

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The present 3D dataset contains 15 specimens selected from the 69 3D models analyzed in the paper “3D topography as an indicator of change in food processing ability in the conodont genus Palmatolepis elements”. 3D topographic analysis of Palmatolepis P1 conodont elements from the Late Devonian period revealed an increase in blade sharpness together with a reduction in platform size. This indicates morphofunctional adaptation to more efficient prey processing. 

Palmatolepis manticolepis UM CTB 144 View specimen

M3#1814 Palmatolepis Manticolepis Type: "3D_surfaces" doi: 10.18563/m3.sf.1814   state:published

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Palmatolepis manticolepis UM CTB 151 View specimen

M3#1815 Palmatolepis Manticolepis Type: "3D_surfaces" doi: 10.18563/m3.sf.1815   state:published

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Palmatolepis manticolepis UM CTB 078 View specimen

M3#1816 Palmatolepis Manticolepis Type: "3D_surfaces" doi: 10.18563/m3.sf.1816   state:published

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Palmatolepis rhomboidea UM CTB 172 View specimen

M3#1817 Palmatolepis rhomboidea Type: "3D_surfaces" doi: 10.18563/m3.sf.1817   state:published

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Palmatolepis glabra UM CTB 080 View specimen

M3#1818 Palmatolepis glabra Type: "3D_surfaces" doi: 10.18563/m3.sf.1818   state:published

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Palmatolepis glabra UM CTB 177 View specimen

M3#1819 Palmatolepis glabra Type: "3D_surfaces" doi: 10.18563/m3.sf.1819   state:published

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Palmatolepis glabra UM CTB 178 View specimen

M3#1820 Palmatolepis glabra Type: "3D_surfaces" doi: 10.18563/m3.sf.1820   state:published

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Palmatolepis glabra UM CTB 179 View specimen

M3#1821 Palmatolepis glabra Type: "3D_surfaces" doi: 10.18563/m3.sf.1821   state:published

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Palmatolepis gracilis UM CTB 186 View specimen

M3#1822 Palmatolepis gracilis Type: "3D_surfaces" doi: 10.18563/m3.sf.1822   state:published

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Palmatolepis perlobata UM CTB 187 View specimen

M3#1823 Palmatolepis perlobata Type: "3D_surfaces" doi: 10.18563/m3.sf.1823   state:published

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Palmatolepis perlobata UM CTB 189 View specimen

M3#1824 Palmatolepis perlobata Type: "3D_surfaces" doi: 10.18563/m3.sf.1824   state:published

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Palmatolepis gracilis UM CTB 190 View specimen

M3#1825 Palmatolepis gracilis Type: "3D_surfaces" doi: 10.18563/m3.sf.1825   state:published

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Palmatolepis perlobata UM CTB 191 View specimen

M3#1826 Palmatolepis perlobata Type: "3D_surfaces" doi: 10.18563/m3.sf.1826   state:published

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Palmatolepis gracilis UM CTB 197 View specimen

M3#1827 Palmatolepis gracilis Type: "3D_surfaces" doi: 10.18563/m3.sf.1827   state:published

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Palmatolepis gracilis UM CTB 200 View specimen

M3#1828 Palmatolepis gracilis Type: "3D_surfaces" doi: 10.18563/m3.sf.1828   state:published

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This contribution contains the 3D models described and figured in the following publication: Molnar, JL, Pierce, SE, Bhullar, B-A, Turner, AH, Hutchinson, JR (accepted). Morphological and functional changes in the crocodylomorph vertebral column with increasing aquatic adaptation. Royal Society Open Science. 

Protosuchus richardsoni AMNH-VP 3024 View specimen

M3#44 8th and 9th dorsal vertebrae, 1st and 2nd lumbar vertebrae, and 5th lumbar and sacral vertebrae. Type: "3D_surfaces" doi: 10.18563/m3.sf44   state:published

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Terrestrisuchus gracilis NHM-PV R 7562 View specimen

M3#45 1st and 2nd lumbar vertebrae, and 5th lumbar and sacral vertebrae Type: "3D_surfaces" doi: 10.18563/m3.sf45   state:published

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Pelagosaurus typus NHM-PV OR 32598 View specimen

M3#46 7th and 8th dorsal vertebrae, 11th and 12th dorsal vertebrae, 15th dorsal vertebra and sacral vertebra. Type: "3D_surfaces" doi: 10.18563/m3.sf46   state:published

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Metriorhynchus superciliosus NHM-PV R 2054 View specimen

M3#47 6th and 7th dorsal vertebrae, 10th and 11th dorsal vertebrae, 17th dorsal vertebra and sacral vertebra Type: "3D_surfaces" doi: 10.18563/m3.sf47   state:published

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Crocodylus niloticus FNC0 View specimen

M3#48 7th and 8th dorsal vertebrae, 1st and 2nd lumbar vertebrae, 5th lumbar vertebra and sacral vertebra. Type: "3D_surfaces" doi: 10.18563/m3.sf48   state:published

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The present 3D Dataset contains the 3D models analyzed in: Kaigai N et al. Morphogenesis and three-dimensional movement of the stomach during the human embryonic period, Anat Rec (Hoboken). 2014 May;297(5):791-797. doi: 10.1002/ar.22833. 

Homo sapiens KC-CS16STM27159 View specimen

M3#56 computationally reconstructed stomach of the human embryo (M3#56_KC-CS16STM27159) at Carnegie Stage 16 (Crown Rump Length= 9.9mm). Type: "3D_surfaces" doi: 10.18563/m3.sf56   state:published

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Homo sapiens KC-CS17STM20383 View specimen

M3#57 computationally reconstructed stomach of the human embryo (M3#57_KC-CS17STM20383) at Carnegie Stage 17 (Crown Rump Length= 12.3mm). Type: "3D_surfaces" doi: 10.18563/m3.sf57   state:published

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Homo sapiens KC-CS18STM21807 View specimen

M3#58 computationally reconstructed stomach of the human embryo (M3#58_KC-CS18STM21807) at Carnegie Stage 18 (Crown Rump Length= 14.7mm). Type: "3D_surfaces" doi: 10.18563/m3.sf58   state:published

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Homo sapiens KC-CS19STM17998 View specimen

M3#59 computationally reconstructed stomach of the human embryo (M3#59_KC-CS19STM17998) at Carnegie Stage 19 (Crown Rump Length was unmeasured ). Type: "3D_surfaces" doi: 10.18563/m3.sf59   state:published

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Homo sapiens KC-CS20STM20785 View specimen

M3#60 computationally reconstructed stomach of the human embryo (M3#60_KC-CS20STM20785) at Carnegie Stage 20 (Crown Rump Length= 18.7 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf60   state:published

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Homo sapiens KC-CS21STM24728 View specimen

M3#61 computationally reconstructed stomach of the human embryo (M3#61_KC-CS21STM24728) at Carnegie Stage 21 (Crown Rump Length= 20.9 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf61   state:published

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Homo sapiens KC-CS22STM26438 View specimen

M3#62 computationally reconstructed stomach of the human embryo (M3#62_KC-CS22STM26438) at Carnegie Stage 22 (Crown Rump Length= 21.5 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf62   state:published

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Homo sapiens KC-CS23STM20018 View specimen

M3#63 computationally reconstructed stomach of the human embryo (M3#63_KC-CS23STM20018) at Carnegie Stage 23 (Crown Rump Length= 23.1 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf63   state:published

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The present 3D Dataset contains the 3D models of external and internal aspects of human upper permanent second molars from the Neolithic necropolis analyzed in the following publication: Le Luyer M., Coquerelle M., Rottier S., Bayle P. (2016): Internal tooth structure and burial practices: insights into the Neolithic necropolis of Gurgy (France, 5100-4000 cal. BC). Plos One 11(7): e0159688. doi: 10.1371/journal.pone.0159688. 

Homo sapiens GLN04-201-ULM2 View specimen

M3#74 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent left second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.74   state:published

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Homo sapiens GLN04-206-ULM2 View specimen

M3#75 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent left second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.75   state:published

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Homo sapiens GLN05-213-URM2 View specimen

M3#76 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent right second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.76   state:published

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Homo sapiens GLN05-215A-URM2 View specimen

M3#77 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent right second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.77   state:published

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Homo sapiens GLN06-215B-URM2 View specimen

M3#78 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent right second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.78   state:published

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Homo sapiens GLN06-223-URM2 View specimen

M3#79 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent right second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.79   state:published

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Homo sapiens GLN04-229-URM2 View specimen

M3#80 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent right second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.80   state:published

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Homo sapiens GLN05-243B-ULM2 View specimen

M3#81 Outer enamel surface (OES) and enamel-dentine junction (EDJ) with reconstructed dentine horn tip of Neolithic upper permanent left second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.81   state:published

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Homo sapiens GLN04-248-ULM2 View specimen

M3#82 Outer enamel surface (OES) and enamel-dentine junction (EDJ) with reconstructed dentine horn tip of Neolithic upper permanent left second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.82   state:published

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Homo sapiens GLN04-252-ULM2 View specimen

M3#83 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent left second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.83   state:published

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Homo sapiens GLN04-253-ULM2 View specimen

M3#84 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent left second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.84   state:published

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Homo sapiens GLN05-257-URM2 View specimen

M3#85 Outer enamel surface (OES) and enamel-dentine junction (EDJ) with reconstructed dentine horn tip of Neolithic upper permanent right second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.85   state:published

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Homo sapiens GLN04-264-ULM2 View specimen

M3#86 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent left second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.86   state:published

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Homo sapiens GLN04-277-URM2 View specimen

M3#87 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent right second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.87   state:published

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Homo sapiens GLN04-289B-URM2 View specimen

M3#88 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent right second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.88   state:published

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Homo sapiens GLN06-291-URM2 View specimen

M3#89 Outer enamel surface (OES) and enamel-dentine junction (EDJ) with reconstructed dentine horn tip of Neolithic upper permanent right second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.89   state:published

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Homo sapiens GLN05-292-URM2 View specimen

M3#90 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent right second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.90   state:published

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Homo sapiens GLN05-294-ULM2 View specimen

M3#91 Outer enamel surface (OES) and enamel-dentine junction (EDJ) with reconstructed dentine horn tip of Neolithic upper permanent left second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.91   state:published

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Homo sapiens GLN05-308-URM2 View specimen

M3#93 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent right second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.93   state:published

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Homo sapiens GLN05-301-ULM2 View specimen

M3#92 Outer enamel surface (OES) and enamel-dentine junction (EDJ) of Neolithic upper permanent left second molar Type: "3D_surfaces" doi: 10.18563/m3.sf.92   state:published

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Using X-ray microtomography, we describe the ossification events during the larval development of a non-teleost actinopterygian species: the Cuban gar Atractosteus tristoechus from the order Lepisosteiformes. We provide a detailed developmental series for each anatomical structure, covering a large sequence of mineralization events going from an early stage (13 days post-hatching, 21mm total length) to an almost fully ossified larval stage (118dph or 87mm in standard length). With this work, we expect to bring new developmental data to be used in further comparative studies with other lineages of bony vertebrates. We also hope that the on-line publication of these twelve successive 3D reconstructions, fully labelled and flagged, will be an educational tool for all students in comparative anatomy. 

Atractosteus tristoechus At1-13dph View specimen

M3#94 At1-13dph : 13 dph larvae, 21 mm TL Type: "3D_surfaces" doi: 10.18563/m3.sf.94   state:published

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Atractosteus tristoechus At2-16dph View specimen

M3#95 Atractosteus tristoechus larva, 16 dph, 26mm SL. Type: "3D_surfaces" doi: 10.18563/m3.sf.95   state:published

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Atractosteus tristoechus At3-19dph View specimen

M3#96 Atractosteus tristoechus larva, 19 dph, 27mm SL. Type: "3D_surfaces" doi: 10.18563/m3.sf.96   state:published

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Atractosteus tristoechus At4-22dph View specimen

M3#97 Atractosteus tristoechus larva, 22dph, 30mm SL. Type: "3D_surfaces" doi: 10.18563/m3.sf.97   state:published

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Atractosteus tristoechus At5-26dph View specimen

M3#98 Atractosteus tristoechus larva, 26 dph, 32mm SL. Type: "3D_surfaces" doi: 10.18563/m3.sf.98   state:published

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Atractosteus tristoechus At6-31dph View specimen

M3#99 Atractosteus tristoechus larva, 31 dph, 39mm SL. Type: "3D_surfaces" doi: 10.18563/m3.sf.99   state:published

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Atractosteus tristoechus At7-37dph View specimen

M3#100 Atractosteus tristoechus larva, 37 dph, 43mm SL. Type: "3D_surfaces" doi: 10.18563/m3.sf.100   state:published

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Atractosteus tristoechus At8-52dph View specimen

M3#101 Atractosteus tristoechus larva, 52 dph, 46mm SL. Type: "3D_surfaces" doi: 10.18563/m3.sf.101   state:published

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Atractosteus tristoechus At9-74dph View specimen

M3#102 Atractosteus tristoechus larva, 74 dph, 61mm SL. Not all structures are colored, only newly ossified ones. Type: "3D_surfaces" doi: 10.18563/m3.sf.102   state:published

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Atractosteus tristoechus At10-89dph View specimen

M3#103 Atractosteus tristoechus larva, 89 dph, 63mm SL. Not all structures are colored, only newly ossified ones. You may find the tag file in the At1-13dph reconstruction data. Type: "3D_surfaces" doi: 10.18563/m3.sf.103   state:published

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Atractosteus tristoechus At11-104dph View specimen

M3#104 Atractosteus tristoechus larva, 104 dph, 70mm SL. Not all structures are colored, only newly ossified ones. Type: "3D_surfaces" doi: 10.18563/m3.sf.104   state:published

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Atractosteus tristoechus At12-118dph View specimen

M3#105 Atractosteus tristoechus larva, 118 dph, 87mm SL. Type: "3D_surfaces" doi: 10.18563/m3.sf.105   state:published

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The present 3D Dataset contains the 3D models analyzed in Neogene sloth assemblages (Mammalia, Pilosa) of the Cocinetas Basin (La Guajira, Colombia): implications for the Great American Biotic Interchange. Palaeontology. doi: 10.1111/pala.12244
  

cf. Nothrotherium indet. MUN STRI 12924 View specimen

M3#106 Fragmentary basicranium with posterior portion of the skull roof. Type: "3D_surfaces" doi: 10.18563/m3.sf.106   state:published

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indet. indet. MUN STRI 16535 View specimen

M3#107 Complete left ulna of a Scelidotheriinae gen. et sp. indet. Type: "3D_surfaces" doi: 10.18563/m3.sf.107   state:published

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The present publication contains the µCT dataset and the 3D models analyzed in the following publication: Mautner, A.-K., A. E. Latimer, U. Fritz, and T. M. Scheyer. An updated description of the osteology of the pancake tortoise Malacochersus tornieri (Testudines: Testudinidae) with special focus on intraspecific variation. Journal of Morphology. https://doi.org/10.1002/jmor.20640 

Malacochersus tornieri ZM 100.102 View specimen

	M3#129 Virtual brain and inner ear endocast of Malacochersus tornieri (ZM 100.102; Zoological Museum of The University of Zurich). This virtual model is accompanied by the 3D dataset. Blue, endocranium; red, blood vessels; purple, semicircular canals; yellow, cranial nerves. Type: "3D_surfaces" doi: 10.18563/m3.sf.129   state:published	Download 3D surface file
	M3#130 3D dataset of skull of Malacochersus tornieri (ZM 100.102) Type: "3D_CT" doi: 10.18563/m3.sf.130   state:published	Download CT data

This contribution contains the 3D models of the bony labyrinths of two protocetid archaeocetes from the locality of Kpogamé, Togo, described and figured in the publication of Mourlam and Orliac (2017). https://doi.org/10.1016/j.cub.2017.04.061  

?Carolinacetus indet. UM KPG-M 164 View specimen

M3#149 bony labyrinth of ? Carolinacetus sp. from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.149   state:published

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indet. indet. UM KPG-M 73 View specimen

M3#150 bony labyrinth of Protocetidae indet. from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.150   state:published

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Considerable morphological variations are found in the middle ear among mammals. Here I present a three-dimensional atlas of the middle ear ossicles of eulipotyphlan mammals. This group has radiated into various environments as terrestrial, aquatic, and subterranean habitats independently in multiple lineages. Therefore, eulipotyphlans are an ideal group to explore the form-function relationship of the middle ear ossicles. This comparative atlas of hedgehogs, true shrews, water shrews, mole shrews, true moles, and shrew moles encourages future studies of the middle ear morphology of this diverse group.
  

Erinaceus europaeus DK2331 View specimen

M3#151 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.151   state:published

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Anourosorex yamashinai SIK_yamashinai View specimen

M3#152 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.152   state:published

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Blarina brevicauda M8003 View specimen

M3#153 Right middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.153   state:published

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Chimarrogale platycephala DK5481 View specimen

M3#162 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.162   state:published

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Suncus murinus DK1227 View specimen

M3#155 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.155   state:published

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Condylura cristata SIK0050 View specimen

M3#156 Right middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.156   state:published

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Euroscaptor klossi SIK0673 View specimen

M3#163 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.163   state:published

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Euroscaptor malayana SIK_malayana View specimen

M3#164 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.164   state:published

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Mogera wogura DK2551 View specimen

M3#159 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.159   state:published

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Talpa altaica SIK_altaica View specimen

M3#161 Right middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.161   state:published

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Urotrichus talpoides DK0887 View specimen

M3#165 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.165   state:published

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Oreoscaptor mizura DK6545 View specimen

M3#166 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.166   state:published

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Scalopus aquaticus SIK_aquaticus View specimen

M3#167 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.167   state:published

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Scapanus orarius SIK_orarius View specimen

M3#168 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.168   state:published

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Neurotrichus gibbsii SIK_gibbsii View specimen

M3#169 Left middle ear ossicles Type: "3D_surfaces" doi: 10.18563/m3.sf.169   state:published

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The present 3D Dataset contains the 3D model analyzed in the following publication: Paulina-Carabajal, A., Sterli, J., Werneburg, I., 2019. The endocranial anatomy of the stem turtle Naomichelys speciosa from the Early Cretaceous of North America. Acta Palaeontologica Polonica, https://doi.org/10.4202/app.00606.2019 

Naomichelys speciosa FMNH PR273 View specimen

M3#428 FMNH_PR273_1 - Naomichlys speciosa - skull Type: "3D_surfaces" doi: 10.18563/m3.sf.428   state:published

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